Table 3 The agreement of the Non-seasonal Subtyping FluChip results to subtype determined by real-time PCR and sequencing
# correctly identified/total analyzed (%) | ||||
|---|---|---|---|---|
Swine samples | Avian samples | Environmental samples | Total | |
Non-seasonal HA subtyping | ||||
H1 | 11% | – | 100% | 16% |
H3 | 25% | 100% | – | 29% |
H5 | – | 100% | 100% | 100% |
H7 | – | 71% | 80% | 75% |
H9 | – | 90% | 78% | 84% |
Non-seasonal NA Subtyping | ||||
N1 | 56% | – | 100% | 62% |
N2 | 19% | 90% | 22% | 40% |
N6 | – | 33% | 0% | 25% |
N8 | – | 100% | – | 100% |
N9 | – | 57% | 80% | 67% |