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Table 3 Results of successfully sequenced specimens positive by panspecies adenovirus [15] assay

From: Panspecies molecular assays detect viral pathogens missed by real-time PCR/reverse-transcriptase PCR among pneumonia patients, Sarawak, Malaysia

  Patient age Hospital Sequencing Result Identity Score
From BLAST
Accession Number from BLAST rPCR Assay AdV-Hexon Assay
1. 6 months Kapit Human mastadenovirus C 98% MH121117.1 Neg Neg
2. 65 years Kapit Human mastadenovirus E 99% KY996453.1 Pos Pos
3. 1 month Kapit Human mastadenovirus C 98% MH121117.1 Neg Neg
4. 66 years Sibu Human mastadenovirus C 97% MH121097.1 Neg Neg
5. 1 year Sibu Human adenovirus C 95% MF358574.1 Pos N/Aa
6. 10 months Kapit Human adenovirus 41 98% KX868523.2 Neg N/Aa
7. 6 months Sibu Human adenovirus C 98% MF358562.1 Pos N/Aa
8. 4 months Kapit human adenovirus 41 98% KX868523.2 Neg N/Aa
9. 1 year Kapit Human adenovirus 5 98% MF358601.1 Pos Pos
10. 35 years Sibu Human adenovirus 4 99% AP014851.1 Pos Pos
11. 3 years Sibu Human adenovirus B 99% KF268212.1 Pos Neg
12. 2 years Sibu Human adenovirus 7 99% MG923582.1 Pos Neg
13. 2 years Sibu Human adenovirus 7 98% MG923582.1 Pos Neg
14. 9 months Sibu Human adenovirus 7 98% MG923582.1 Pos Neg
15. 6 months Kapit Human adenovirus 7 97% MG923582.1 Pos Pos
16. 2 years Sibu Human adenovirus 7 99% MG923582.1 Pos Neg
17. 1 month Sibu Human adenovirus 5 99% MF358604.1 Pos Neg
18. 8 months Sibu Human adenovirus 7 98% MG923582.1 Pos Pos
19. 8 months Sibu Human adenovirus 7 98% MG923582.1 Pos Pos
20. 7 months Sibu Human adenovirus 7 98% MG923582.1 Pos Pos
21. 1 year Sibu Human adenovirus 7 97% MG923582.1 Pos Pos
22. 8 months Sibu Desmondus rotundus adenovirus 1 100% KX774303.1 Pos Pos
23. 1 month Sibu Desmondus rotundus adenovirus 1 100% KX774303.1 Pos Pos
24. 6 months Sibu Human adenovirus 7 96% MG923582.1 Pos Pos
25. 3 months Sibu Human adenovirus 7 93% MG923582.1 Pos Pos
26. 4 months Sibu Human adenovirus 7 98% MG923582.1 Pos Pos
27. 2 years Sibu Human adenovirus 7 98% MG923582.1 Pos Pos
28. 2 months Sibu Human adenovirus 7 97% MG923582.1 Pos Pos
29. 54 years Sibu Human adenovirus 5 96% MF358604.1 Pos Neg
30. 78 years Sibu Human adenovirus 5 98% MF358604.1 Pos Neg
  1. aSpecimens at Duke-NUS not run by conventional AdV-Hexon assay